CDS

Accession Number TCMCG016C19117
gbkey CDS
Protein Id OMO67840.1
Location join(42802..42863,42982..43063,43486..43555,43873..43961,44058..44134,45318..45374,45501..45613,45722..45801,45898..45984,46688..46768,47625..47786,47867..47971,48367..48418,48518..48636,49585..49665,50126..50263,50799..50888,51593..51646,51993..52055,52308..52550)
Organism Corchorus capsularis
locus_tag CCACVL1_20280

Protein

Length 634aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01012346.1
Definition Transcription factor TFIIB [Corchorus capsularis]
Locus_tag CCACVL1_20280

EGGNOG-MAPPER Annotation

COG_category K
Description Transcription factor IIIB
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03021        [VIEW IN KEGG]
KEGG_ko ko:K15196        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000126        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005667        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006351        [VIEW IN EMBL-EBI]
GO:0006352        [VIEW IN EMBL-EBI]
GO:0006383        [VIEW IN EMBL-EBI]
GO:0006384        [VIEW IN EMBL-EBI]
GO:0006399        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009303        [VIEW IN EMBL-EBI]
GO:0009304        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016072        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032774        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034654        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044798        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090576        [VIEW IN EMBL-EBI]
GO:0097659        [VIEW IN EMBL-EBI]
GO:0098781        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGTGTACTGTAGTAGTTGCTCAAGAAACGTTCGTGGAGAACGCATCGGTGACGGTCGTTTGTGTTGTGCTTTTTGTGGAAAGGTGTTAGAAGAAGATTTTTTGTCATCAGAACCGCAATTTGTTAAAGATTCATCTGGCCAGAGCAGACTATCTGGGAATTTTGTAAGGTCTGTTCAAGAATCAGACTCGCGTAGAAGGACTTTGGATAGAGCTTATGATGAGATGAGATTAATGAAGAATGCATTGAGCATTGATGATTATAGTGATGATGTCGTTGAAACTGCTGGACGCTTTTATGAAATTGCCCTTGAACGGAATTTCACCAGGGGGAGGAGGTCAGAACTAGTACAGGCTGCATGTCTTTATCTTGCGTGTCGGCAAAAGAAAAAGCCTTTCCTTCTTATTGATTTTTCAAGTTATTTAAATACAAACGTTTATGAGCTAGGCTCTGTATATTTGCAGCTTTGCTATGTGTTGTACCTTGCTGAGACGAAAGATCTCCAAAAACTAATTGATCCTTCAATTTTTATTCATAAATTTACAAATACTTTGATACCCGAAGGGAATGATGAAGTAGTTAAAACTGCACGAGACATTTTAGCTAGCATGAAACGTGACTGGATGCAGACAGGGAGAAAACCCAGTGGATTATGTGGTGCGGCGCTATACATTTCTGCACTTTCACATGGTCTGAAGTGTTCTAAGTCAGAAATTATAAGGGTTGTGCACATTTGTGAAGCTACATTGACAAAGCGGTTGGTTGAATTTGAGAATACTGACTCTGGAAACTTGACGATGGAGGAATTTATGGAAAAGGAGAAGGAGCTGCGAACAAGTTCAATTACTAAAAAACAACCAAATATTGGTTCAAAAGAGGCCAGTGGACAGGAATTGCTTTGTAAGCATATGAAGAAAAAAGCTTTTGCCTATGGACTTTGTGAAGAATGTTATGAAGAGTTTATGAAAGTTTCAGGAGGACTTGATGGGGGATCAGATCCACCTGCATTTCAGCGTGCTGAGAAAGAGAGATTAGCAAAAATGTCTATTGAGGAAAATTCTAATGGAGCATCAGGCAGCCCTCTTGCAAGTGGACTAAAAAATCATGAAAGTATTGGGCTTCCAGAGGGTGCAACTAACAAGGCAGCCACTGATGAAGGTGACAATGGTAAATTTCCTGAAGTTGATGGTAGTGGTGTTGAATCGGACAACTTTTCTGATATTGATGATGTTGAGGTTGATGGTTATCTTCACAATGAGGAGGAGAAGCAATTCAAGAAGATAATTTGGGAAGAGATGAATCGGGAATATCTTGAGGAACAAGCAGCCAAAGAAGCAGCCGCAGCAGCTGCCAAGGAAGCATATAAGGCTAAATTTGATAATTGTCCAGAGGACCTTCAAGCTGCACAAGAGCTTGCTGCAGCTGCTGCCGCAGTAGTGGAAAAATCTAGAAAGGAAAGGCAACAAAAGCGAGCTGCTGAATTAAAAAGTTCTGGCCCTCCTCAGACTGCTGCAGAAGCAACCCGTCAAATGTTGGCTAAAAAGAGGCTAAGCTCAAAGATCAACTACGATGCATTGGCGAAACTATTTGATGAATCGGCTGCCGCGGAGAAACCCAAGAAACAGAAAAATGAATCACATTCAGAAGAAAAGGAAGATGAGGAGTTCAAACTTTACTCTTTAAACATTCCTGGACCTTTGATCTCAGTCTTGTCAACCAAAATATTCTCCAGAGACTTGCCACCATCAGCACCAGCGGCAGTTTCCAAGAAGTCAGAAGCATCCAATCCTCCACCCCAAGCTGGCATCACTAAACCCTTGAAAAGCTTCTCCAAAAGTAGCCTGTTCATTGCCAAACTCAATCCCTCCATACTTAGCAGCAATCCAGTTGCGAAAACTTTATAA
Protein:  
MVYCSSCSRNVRGERIGDGRLCCAFCGKVLEEDFLSSEPQFVKDSSGQSRLSGNFVRSVQESDSRRRTLDRAYDEMRLMKNALSIDDYSDDVVETAGRFYEIALERNFTRGRRSELVQAACLYLACRQKKKPFLLIDFSSYLNTNVYELGSVYLQLCYVLYLAETKDLQKLIDPSIFIHKFTNTLIPEGNDEVVKTARDILASMKRDWMQTGRKPSGLCGAALYISALSHGLKCSKSEIIRVVHICEATLTKRLVEFENTDSGNLTMEEFMEKEKELRTSSITKKQPNIGSKEASGQELLCKHMKKKAFAYGLCEECYEEFMKVSGGLDGGSDPPAFQRAEKERLAKMSIEENSNGASGSPLASGLKNHESIGLPEGATNKAATDEGDNGKFPEVDGSGVESDNFSDIDDVEVDGYLHNEEEKQFKKIIWEEMNREYLEEQAAKEAAAAAAKEAYKAKFDNCPEDLQAAQELAAAAAAVVEKSRKERQQKRAAELKSSGPPQTAAEATRQMLAKKRLSSKINYDALAKLFDESAAAEKPKKQKNESHSEEKEDEEFKLYSLNIPGPLISVLSTKIFSRDLPPSAPAAVSKKSEASNPPPQAGITKPLKSFSKSSLFIAKLNPSILSSNPVAKTL